Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 KRT18P68-201ENST00000392293 1000 ntBASIC20.55■□□□□ 0.88
UBP1Q9NZI7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 CYP2T3P-201ENST00000601990 817 ntBASIC20.55■□□□□ 0.88
UBP1Q9NZI7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 AC105036.2-201ENST00000569468 176 ntBASIC20.54■□□□□ 0.88
UBP1Q9NZI7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBP1Q9NZI7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.53■□□□□ 0.88
UBP1Q9NZI7 KRT17P1-201ENST00000399211 1546 ntBASIC20.53■□□□□ 0.88
UBP1Q9NZI7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBP1Q9NZI7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBP1Q9NZI7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBP1Q9NZI7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBP1Q9NZI7 AC006970.2-201ENST00000450065 779 ntBASIC20.52■□□□□ 0.88
UBP1Q9NZI7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.52■□□□□ 0.88
UBP1Q9NZI7 AC133552.2-202ENST00000575694 574 ntBASIC20.52■□□□□ 0.88
UBP1Q9NZI7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.52■□□□□ 0.88
UBP1Q9NZI7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
UBP1Q9NZI7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.52■□□□□ 0.87
UBP1Q9NZI7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBP1Q9NZI7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.52■□□□□ 0.87
UBP1Q9NZI7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 AL512625.2-201ENST00000417533 625 ntBASIC20.51■□□□□ 0.87
UBP1Q9NZI7 AF201337.1-201ENST00000520239 748 ntBASIC20.51■□□□□ 0.87
UBP1Q9NZI7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.51■□□□□ 0.87
UBP1Q9NZI7 AC105020.6-201ENST00000621523 1217 ntBASIC20.51■□□□□ 0.87
UBP1Q9NZI7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.51■□□□□ 0.87
UBP1Q9NZI7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms