Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 AC103702.1-201ENST00000548801 2630 ntBASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 LBX2-AS1-202ENST00000603175 2083 ntBASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CDC42SE1Q9NRR8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 CICP6-201ENST00000457191 2729 ntBASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CDC42SE1Q9NRR8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 C8orf49-201ENST00000525043 1968 ntBASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 WASH5P-204ENST00000632292 975 ntBASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms