Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 DUX4L7-201ENST00000630678 1275 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DUX4L5-201ENST00000630834 1275 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 AC027612.3-201ENST00000413684 1047 ntBASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 AC010141.2-201ENST00000452426 721 ntBASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 KRT18P20-201ENST00000548986 1279 ntBASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 RARRES2P11-201ENST00000635158 484 ntBASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB16Q9NRJ7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB16Q9NRJ7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 MIR6084-201ENST00000622012 110 ntBASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 AC019069.1-201ENST00000610008 1333 ntBASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB16Q9NRJ7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 AL162377.1-201ENST00000618844 1793 ntBASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 BCL2-203ENST00000589955 5011 ntBASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms