Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 TERF1P5-201ENST00000477545 1207 ntBASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTPS2Q9NRF8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 AC011767.1-201ENST00000617410 1153 ntBASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTPS2Q9NRF8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.71■□□□□ 0.58
CTPS2Q9NRF8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.71■□□□□ 0.58
CTPS2Q9NRF8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 IKBKGP1-201ENST00000612193 1073 ntBASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.7■□□□□ 0.58
CTPS2Q9NRF8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 BID-214ENST00000617586 542 ntTSL 5 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTPS2Q9NRF8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms