Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
NLRC4Q9NPP4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NLRC4Q9NPP4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 AL591742.1-201ENST00000604433 565 ntBASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NLRC4Q9NPP4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 KRT18P5-201ENST00000436075 1291 ntBASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 AC137761.2-201ENST00000561729 223 ntBASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 AC145350.3-201ENST00000569033 163 ntBASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 AC016405.3-201ENST00000607710 860 ntBASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
NLRC4Q9NPP4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NLRC4Q9NPP4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
NLRC4Q9NPP4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
NLRC4Q9NPP4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
NLRC4Q9NPP4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 AL356652.1-201ENST00000615962 565 ntBASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.82■■□□□ 1.08
NLRC4Q9NPP4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 AL691432.2-201ENST00000607222 2038 ntBASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 AC007952.6-201ENST00000573168 2673 ntBASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 AC003957.1-201ENST00000625108 2673 ntBASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NLRC4Q9NPP4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 AC087633.2-202ENST00000565166 1439 ntBASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 CYP21A1P-202ENST00000354927 1481 ntBASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NLRC4Q9NPP4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms