Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BRD9Q9H8M2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRD9Q9H8M2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
BRD9Q9H8M2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BRD9Q9H8M2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BRD9Q9H8M2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 AL355075.4-201ENST00000554988 638 ntBASIC20.89■□□□□ 0.93
BRD9Q9H8M2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BRD9Q9H8M2 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.89■□□□□ 0.93
BRD9Q9H8M2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD9Q9H8M2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
BRD9Q9H8M2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.86■□□□□ 0.93
BRD9Q9H8M2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.85■□□□□ 0.93
BRD9Q9H8M2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRD9Q9H8M2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRD9Q9H8M2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms