Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 PRKY-204ENST00000533551 1019 ntBASIC23.58■■□□□ 1.37
SH2D4AQ9H788 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
SH2D4AQ9H788 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SH2D4AQ9H788 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SH2D4AQ9H788 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.58■■□□□ 1.36
SH2D4AQ9H788 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SH2D4AQ9H788 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH2D4AQ9H788 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 AC110285.5-201ENST00000611501 352 ntBASIC23.56■■□□□ 1.36
SH2D4AQ9H788 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.56■■□□□ 1.36
SH2D4AQ9H788 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 KRASP1-201ENST00000407852 552 ntBASIC23.55■■□□□ 1.36
SH2D4AQ9H788 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH2D4AQ9H788 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 AC012618.2-201ENST00000428058 849 ntBASIC23.54■■□□□ 1.36
SH2D4AQ9H788 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 MIR4497-201ENST00000583208 89 ntBASIC23.54■■□□□ 1.36
SH2D4AQ9H788 Z99916.2-201ENST00000604037 246 ntBASIC23.54■■□□□ 1.36
SH2D4AQ9H788 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH2D4AQ9H788 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 FEM1AP4-201ENST00000443167 1987 ntBASIC23.53■■□□□ 1.36
SH2D4AQ9H788 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 AL121829.2-201ENST00000620908 328 ntBASIC23.53■■□□□ 1.36
SH2D4AQ9H788 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH2D4AQ9H788 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 AL135905.2-201ENST00000584934 1404 ntBASIC23.52■■□□□ 1.36
SH2D4AQ9H788 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms