Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 KRT18P29-201ENST00000397031 1267 ntBASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
POLR3FQ9H1D9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.23■■□□□ 1.15
POLR3FQ9H1D9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 AC128676.1-201ENST00000454392 318 ntBASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 AC008687.6-201ENST00000596318 630 ntBASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 AC073648.6-201ENST00000641589 218 ntBASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
POLR3FQ9H1D9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 PRORSD1P-201ENST00000295112 541 ntBASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POLR3FQ9H1D9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 AC233263.1-201ENST00000578059 224 ntBASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR3FQ9H1D9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
POLR3FQ9H1D9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms