Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2J3Q9H1A7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2J3Q9H1A7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
POLR2J3Q9H1A7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2J3Q9H1A7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
POLR2J3Q9H1A7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 SMG8-203ENST00000578922 2178 ntBASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 AIRN-201ENST00000601203 4374 ntBASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 RNF165-205ENST00000588679 2904 ntBASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR2J3Q9H1A7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
POLR2J3Q9H1A7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.58■□□□□ 0.57
POLR2J3Q9H1A7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2J3Q9H1A7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
POLR2J3Q9H1A7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR2J3Q9H1A7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.58■□□□□ 0.57
POLR2J3Q9H1A7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.58■□□□□ 0.56
POLR2J3Q9H1A7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
POLR2J3Q9H1A7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms