Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
NBPF3Q9H094 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.97■■□□□ 1.43
NBPF3Q9H094 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NBPF3Q9H094 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.97■■□□□ 1.43
NBPF3Q9H094 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NBPF3Q9H094 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.97■■□□□ 1.43
NBPF3Q9H094 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
NBPF3Q9H094 AC092720.2-201ENST00000602388 1665 ntBASIC23.97■■□□□ 1.43
NBPF3Q9H094 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
NBPF3Q9H094 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
NBPF3Q9H094 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.96■■□□□ 1.43
NBPF3Q9H094 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.96■■□□□ 1.43
NBPF3Q9H094 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
NBPF3Q9H094 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.96■■□□□ 1.43
NBPF3Q9H094 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.96■■□□□ 1.43
NBPF3Q9H094 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.96■■□□□ 1.43
NBPF3Q9H094 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
NBPF3Q9H094 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
NBPF3Q9H094 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.95■■□□□ 1.43
NBPF3Q9H094 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
NBPF3Q9H094 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
NBPF3Q9H094 LINC01006-201ENST00000333319 2292 ntBASIC23.95■■□□□ 1.43
NBPF3Q9H094 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
NBPF3Q9H094 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 AC008550.1-201ENST00000511500 884 ntBASIC23.95■■□□□ 1.42
NBPF3Q9H094 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
NBPF3Q9H094 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
NBPF3Q9H094 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 AL512408.1-201ENST00000569378 2000 ntBASIC23.94■■□□□ 1.42
NBPF3Q9H094 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.94■■□□□ 1.42
NBPF3Q9H094 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NBPF3Q9H094 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.94■■□□□ 1.42
NBPF3Q9H094 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
NBPF3Q9H094 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NBPF3Q9H094 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NBPF3Q9H094 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.93■■□□□ 1.42
NBPF3Q9H094 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NBPF3Q9H094 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.93■■□□□ 1.42
NBPF3Q9H094 GABARAPL3-202ENST00000624044 1851 ntBASIC23.93■■□□□ 1.42
NBPF3Q9H094 SMG8-203ENST00000578922 2178 ntBASIC23.93■■□□□ 1.42
NBPF3Q9H094 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NBPF3Q9H094 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NBPF3Q9H094 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.93■■□□□ 1.42
NBPF3Q9H094 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
NBPF3Q9H094 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NBPF3Q9H094 DPP3P2-201ENST00000416030 1696 ntBASIC23.92■■□□□ 1.42
NBPF3Q9H094 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.92■■□□□ 1.42
NBPF3Q9H094 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
NBPF3Q9H094 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NBPF3Q9H094 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms