Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 AC068338.2-201ENST00000563278 1430 ntBASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 CNN2P6-201ENST00000439038 900 ntBASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TRIM54Q9BYV2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 RARRES2P4-201ENST00000514074 484 ntBASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 AC016405.3-201ENST00000607710 860 ntBASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRIM54Q9BYV2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 AC087633.2-202ENST00000565166 1439 ntBASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 AL356652.1-201ENST00000615962 565 ntBASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 AC100791.3-201ENST00000617619 330 ntBASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 CYP21A1P-202ENST00000354927 1481 ntBASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
TRIM54Q9BYV2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 AC007952.6-201ENST00000573168 2673 ntBASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 AC003957.1-201ENST00000625108 2673 ntBASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 MCRIP2P1-201ENST00000394346 511 ntBASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 AL137784.2-201ENST00000607332 1000 ntBASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM54Q9BYV2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM54Q9BYV2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms