Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 AL157384.1-201ENST00000445995 2473 ntBASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
KRTAP4-3Q9BYR4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 SMG8-203ENST00000578922 2178 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 KRASP1-201ENST00000407852 552 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 KRT17P3-201ENST00000420566 1262 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 POM121L13P-201ENST00000422362 380 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TSPY7P-201ENST00000431358 1114 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 SNORA78-201ENST00000459373 127 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 MTDHP1-201ENST00000605323 784 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 AC120498.8-201ENST00000614275 531 ntBASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
KRTAP4-3Q9BYR4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms