Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.12■□□□□ 0.97
LRRC3Q9BY71 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC3Q9BY71 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC3Q9BY71 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC3Q9BY71 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.08■□□□□ 0.97
LRRC3Q9BY71 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LRRC3Q9BY71 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.08■□□□□ 0.97
LRRC3Q9BY71 AL121829.2-201ENST00000620908 328 ntBASIC21.08■□□□□ 0.97
LRRC3Q9BY71 AL049637.2-201ENST00000641778 930 ntBASIC21.08■□□□□ 0.97
LRRC3Q9BY71 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC3Q9BY71 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC3Q9BY71 FEM1AP4-201ENST00000443167 1987 ntBASIC21.07■□□□□ 0.96
LRRC3Q9BY71 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 TSPY7P-201ENST00000431358 1114 ntBASIC21.07■□□□□ 0.96
LRRC3Q9BY71 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC3Q9BY71 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms