Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 RARRES2P10-201ENST00000564312 460 ntBASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 AP001412.1-201ENST00000608405 714 ntBASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 REXO1L12P-201ENST00000622156 912 ntBASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC46A2Q9BY10 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 PTBP1P-201ENST00000554374 1601 ntBASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC46A2Q9BY10 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 AC113410.3-201ENST00000623366 203 ntBASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC46A2Q9BY10 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 KRT17P2-201ENST00000300992 1314 ntBASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC46A2Q9BY10 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC46A2Q9BY10 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 AC211429.1-201ENST00000415277 523 ntBASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 ECEL1P3-201ENST00000427961 737 ntBASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC46A2Q9BY10 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms