Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 B3GAT3P1-201ENST00000471720 806 ntBASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN3Q9BTN0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 AC116562.4-202ENST00000641738 218 ntBASIC20.33■□□□□ 0.85
LRFN3Q9BTN0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.33■□□□□ 0.84
LRFN3Q9BTN0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRFN3Q9BTN0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
LRFN3Q9BTN0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRFN3Q9BTN0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRFN3Q9BTN0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
LRFN3Q9BTN0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 AC026271.3-201ENST00000571884 352 ntBASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 AL356652.1-201ENST00000615962 565 ntBASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN3Q9BTN0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 AC092183.1-201ENST00000469884 875 ntBASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LRFN3Q9BTN0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 HLA-G-203ENST00000376818 1127 ntBASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 KRT18P13-201ENST00000400056 1290 ntBASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 AC011506.1-201ENST00000474329 610 ntBASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 AC092119.3-201ENST00000612618 583 ntBASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 AC117500.6-201ENST00000624871 588 ntBASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRFN3Q9BTN0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 PRSS44-201ENST00000515154 1146 ntBASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRFN3Q9BTN0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms