Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TIMP4Q99727 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMP4Q99727 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TIMP4Q99727 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TIMP4Q99727 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.5■□□□□ 0.55
TIMP4Q99727 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMP4Q99727 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.5■□□□□ 0.55
TIMP4Q99727 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TIMP4Q99727 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMP4Q99727 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TIMP4Q99727 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.49■□□□□ 0.55
TIMP4Q99727 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP4Q99727 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP4Q99727 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP4Q99727 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP4Q99727 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TIMP4Q99727 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP4Q99727 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP4Q99727 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP4Q99727 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP4Q99727 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP4Q99727 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TIMP4Q99727 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP4Q99727 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMP4Q99727 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TIMP4Q99727 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TIMP4Q99727 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP4Q99727 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP4Q99727 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMP4Q99727 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMP4Q99727 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP4Q99727 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP4Q99727 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP4Q99727 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP4Q99727 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP4Q99727 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TIMP4Q99727 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.48■□□□□ 0.55
TIMP4Q99727 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.48■□□□□ 0.55
TIMP4Q99727 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.48■□□□□ 0.55
TIMP4Q99727 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMP4Q99727 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP4Q99727 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMP4Q99727 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMP4Q99727 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TIMP4Q99727 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TIMP4Q99727 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TIMP4Q99727 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.47■□□□□ 0.55
TIMP4Q99727 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TIMP4Q99727 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.47■□□□□ 0.55
TIMP4Q99727 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.47■□□□□ 0.55
TIMP4Q99727 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.47■□□□□ 0.55
TIMP4Q99727 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.47■□□□□ 0.55
TIMP4Q99727 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TIMP4Q99727 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TIMP4Q99727 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMP4Q99727 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP4Q99727 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TIMP4Q99727 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMP4Q99727 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP4Q99727 AL512408.1-201ENST00000569378 2000 ntBASIC18.46■□□□□ 0.55
TIMP4Q99727 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMP4Q99727 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.46■□□□□ 0.55
TIMP4Q99727 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TIMP4Q99727 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TIMP4Q99727 POU5F1P3-201ENST00000428824 1078 ntBASIC18.46■□□□□ 0.55
TIMP4Q99727 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.46■□□□□ 0.55
TIMP4Q99727 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMP4Q99727 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMP4Q99727 AC112907.3-201ENST00000577781 2400 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms