Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GFI1Q99684 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.41■□□□□ 0.38
GFI1Q99684 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.41■□□□□ 0.38
GFI1Q99684 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.41■□□□□ 0.38
GFI1Q99684 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.41■□□□□ 0.38
GFI1Q99684 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1Q99684 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.4■□□□□ 0.38
GFI1Q99684 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.4■□□□□ 0.38
GFI1Q99684 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.4■□□□□ 0.38
GFI1Q99684 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GFI1Q99684 MIR939-201ENST00000401314 82 ntBASIC17.4■□□□□ 0.38
GFI1Q99684 PBX2P1-201ENST00000493219 1291 ntBASIC17.4■□□□□ 0.38
GFI1Q99684 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.4■□□□□ 0.38
GFI1Q99684 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GFI1Q99684 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1Q99684 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GFI1Q99684 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.4■□□□□ 0.38
GFI1Q99684 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.39■□□□□ 0.38
GFI1Q99684 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.39■□□□□ 0.38
GFI1Q99684 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.39■□□□□ 0.38
GFI1Q99684 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
GFI1Q99684 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.39■□□□□ 0.37
GFI1Q99684 AC091799.1-201ENST00000422823 811 ntBASIC17.39■□□□□ 0.37
GFI1Q99684 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.39■□□□□ 0.37
GFI1Q99684 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 AF213884.3-201ENST00000563833 479 ntBASIC17.39■□□□□ 0.37
GFI1Q99684 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.39■□□□□ 0.37
GFI1Q99684 AL355001.2-201ENST00000620617 1191 ntBASIC17.39■□□□□ 0.37
GFI1Q99684 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.39■□□□□ 0.37
GFI1Q99684 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.39■□□□□ 0.37
GFI1Q99684 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.39■□□□□ 0.37
GFI1Q99684 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1Q99684 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.39■□□□□ 0.37
GFI1Q99684 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.39■□□□□ 0.37
GFI1Q99684 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.39■□□□□ 0.37
GFI1Q99684 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GFI1Q99684 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
GFI1Q99684 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.39■□□□□ 0.37
GFI1Q99684 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
GFI1Q99684 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
GFI1Q99684 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
GFI1Q99684 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.38■□□□□ 0.37
GFI1Q99684 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.38■□□□□ 0.37
GFI1Q99684 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GFI1Q99684 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.38■□□□□ 0.37
GFI1Q99684 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.38■□□□□ 0.37
GFI1Q99684 AC096631.2-201ENST00000436136 790 ntBASIC17.38■□□□□ 0.37
GFI1Q99684 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.38■□□□□ 0.37
GFI1Q99684 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GFI1Q99684 AC106739.1-201ENST00000617035 715 ntBASIC17.38■□□□□ 0.37
GFI1Q99684 AC120498.10-201ENST00000621827 505 ntBASIC17.38■□□□□ 0.37
GFI1Q99684 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.38■□□□□ 0.37
GFI1Q99684 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.38■□□□□ 0.37
GFI1Q99684 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.38■□□□□ 0.37
GFI1Q99684 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.38■□□□□ 0.37
GFI1Q99684 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.38■□□□□ 0.37
GFI1Q99684 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1Q99684 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GFI1Q99684 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms