Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5RAP2Q96SN8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.93■■□□□ 1.42
CDK5RAP2Q96SN8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.93■■□□□ 1.42
CDK5RAP2Q96SN8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.93■■□□□ 1.42
CDK5RAP2Q96SN8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CDK5RAP2Q96SN8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 AL031963.3-201ENST00000606441 850 ntBASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 FP700111.2-201ENST00000619190 1892 ntBASIC23.92■■□□□ 1.42
CDK5RAP2Q96SN8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
CDK5RAP2Q96SN8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 RPS2P55-201ENST00000397318 883 ntBASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 AC107956.1-201ENST00000494359 873 ntBASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 AC110285.5-201ENST00000611501 352 ntBASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.9■■□□□ 1.42
CDK5RAP2Q96SN8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDK5RAP2Q96SN8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDK5RAP2Q96SN8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.89■■□□□ 1.41
CDK5RAP2Q96SN8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDK5RAP2Q96SN8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
CDK5RAP2Q96SN8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
CDK5RAP2Q96SN8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 AC007225.1-201ENST00000566331 1836 ntBASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 SNORA78-201ENST00000459373 127 ntBASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 AL049637.2-201ENST00000641778 930 ntBASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
CDK5RAP2Q96SN8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 NUDT16P1-203ENST00000513809 620 ntBASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 Z99916.2-201ENST00000604037 246 ntBASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5RAP2Q96SN8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms