Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 AC093787.1-201ENST00000450396 207 ntBASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 AC105036.2-201ENST00000569468 176 ntBASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD1Q96RS6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 AC083906.2-201ENST00000511578 360 ntBASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NUDCD1Q96RS6 AC010980.2-201ENST00000587099 1412 ntBASIC20.77■□□□□ 0.91
NUDCD1Q96RS6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 CYP21A1P-202ENST00000354927 1481 ntBASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 GPX1P1-201ENST00000388829 606 ntBASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD1Q96RS6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD1Q96RS6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms