Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CDHR1Q96JP9 PTBP1P-201ENST00000554374 1601 ntBASIC22.68■■□□□ 1.22
CDHR1Q96JP9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 AL031963.3-201ENST00000606441 850 ntBASIC22.68■■□□□ 1.22
CDHR1Q96JP9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.68■■□□□ 1.22
CDHR1Q96JP9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 KRT8P20-201ENST00000423953 1409 ntBASIC22.67■■□□□ 1.22
CDHR1Q96JP9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 AC133681.1-201ENST00000465482 601 ntBASIC22.67■■□□□ 1.22
CDHR1Q96JP9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDHR1Q96JP9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 AL121829.2-201ENST00000620908 328 ntBASIC22.66■■□□□ 1.22
CDHR1Q96JP9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDHR1Q96JP9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 AC239809.2-201ENST00000415381 517 ntBASIC22.65■■□□□ 1.22
CDHR1Q96JP9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 PRKY-204ENST00000533551 1019 ntBASIC22.65■■□□□ 1.22
CDHR1Q96JP9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CDHR1Q96JP9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDHR1Q96JP9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms