Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ITCHQ96J02 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.17■□□□□ 0.66
ITCHQ96J02 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.17■□□□□ 0.66
ITCHQ96J02 YBX1P1-201ENST00000445822 960 ntBASIC19.17■□□□□ 0.66
ITCHQ96J02 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.17■□□□□ 0.66
ITCHQ96J02 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.17■□□□□ 0.66
ITCHQ96J02 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.17■□□□□ 0.66
ITCHQ96J02 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.17■□□□□ 0.66
ITCHQ96J02 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ITCHQ96J02 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.17■□□□□ 0.66
ITCHQ96J02 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.16■□□□□ 0.66
ITCHQ96J02 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.16■□□□□ 0.66
ITCHQ96J02 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.16■□□□□ 0.66
ITCHQ96J02 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.16■□□□□ 0.66
ITCHQ96J02 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.16■□□□□ 0.66
ITCHQ96J02 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ITCHQ96J02 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.16■□□□□ 0.66
ITCHQ96J02 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 CDV3P1-201ENST00000471403 739 ntBASIC19.16■□□□□ 0.66
ITCHQ96J02 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ITCHQ96J02 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.16■□□□□ 0.66
ITCHQ96J02 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.16■□□□□ 0.66
ITCHQ96J02 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.16■□□□□ 0.66
ITCHQ96J02 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITCHQ96J02 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITCHQ96J02 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITCHQ96J02 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ITCHQ96J02 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.15■□□□□ 0.66
ITCHQ96J02 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.15■□□□□ 0.66
ITCHQ96J02 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.15■□□□□ 0.66
ITCHQ96J02 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ITCHQ96J02 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ITCHQ96J02 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ITCHQ96J02 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ITCHQ96J02 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.15■□□□□ 0.66
ITCHQ96J02 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.15■□□□□ 0.66
ITCHQ96J02 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.15■□□□□ 0.66
ITCHQ96J02 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 AC019069.1-201ENST00000610008 1333 ntBASIC19.15■□□□□ 0.66
ITCHQ96J02 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 AC004854.2-201ENST00000608450 1441 ntBASIC19.15■□□□□ 0.66
ITCHQ96J02 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITCHQ96J02 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.15■□□□□ 0.66
ITCHQ96J02 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.15■□□□□ 0.66
ITCHQ96J02 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
ITCHQ96J02 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITCHQ96J02 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ITCHQ96J02 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITCHQ96J02 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ITCHQ96J02 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITCHQ96J02 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ITCHQ96J02 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITCHQ96J02 KRT18P14-201ENST00000534205 1250 ntBASIC19.14■□□□□ 0.65
ITCHQ96J02 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITCHQ96J02 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ITCHQ96J02 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.14■□□□□ 0.65
ITCHQ96J02 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.14■□□□□ 0.65
ITCHQ96J02 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.14■□□□□ 0.65
ITCHQ96J02 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.14■□□□□ 0.65
ITCHQ96J02 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITCHQ96J02 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ITCHQ96J02 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ITCHQ96J02 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.13■□□□□ 0.65
ITCHQ96J02 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
ITCHQ96J02 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.13■□□□□ 0.65
ITCHQ96J02 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms