Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 MCRIP2P1-201ENST00000394346 511 ntBASIC20.6■□□□□ 0.89
RTP4Q96DX8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.6■□□□□ 0.89
RTP4Q96DX8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTP4Q96DX8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTP4Q96DX8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTP4Q96DX8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTP4Q96DX8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTP4Q96DX8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 TMEM179-206ENST00000616017 1645 ntBASIC20.59■□□□□ 0.89
RTP4Q96DX8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTP4Q96DX8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RTP4Q96DX8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTP4Q96DX8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTP4Q96DX8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RTP4Q96DX8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RTP4Q96DX8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RTP4Q96DX8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.58■□□□□ 0.89
RTP4Q96DX8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTP4Q96DX8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.58■□□□□ 0.89
RTP4Q96DX8 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.58■□□□□ 0.89
RTP4Q96DX8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.58■□□□□ 0.89
RTP4Q96DX8 AC011767.1-201ENST00000617410 1153 ntBASIC20.58■□□□□ 0.89
RTP4Q96DX8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RTP4Q96DX8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RTP4Q96DX8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.58■□□□□ 0.88
RTP4Q96DX8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTP4Q96DX8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTP4Q96DX8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTP4Q96DX8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTP4Q96DX8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTP4Q96DX8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTP4Q96DX8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.57■□□□□ 0.88
RTP4Q96DX8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTP4Q96DX8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTP4Q96DX8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTP4Q96DX8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTP4Q96DX8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 CROCCP5-201ENST00000436658 830 ntBASIC20.56■□□□□ 0.88
RTP4Q96DX8 AC006970.2-201ENST00000450065 779 ntBASIC20.56■□□□□ 0.88
RTP4Q96DX8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTP4Q96DX8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTP4Q96DX8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTP4Q96DX8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RTP4Q96DX8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms