Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC58Q96CX6 AC093484.2-201ENST00000580996 2166 ntBASIC19.16■□□□□ 0.66
LRRC58Q96CX6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 AL136967.2-201ENST00000623968 743 ntBASIC19.16■□□□□ 0.66
LRRC58Q96CX6 TNXA-203ENST00000507684 2038 ntBASIC19.16■□□□□ 0.66
LRRC58Q96CX6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 TREX1-205ENST00000625293 1783 ntBASIC19.16■□□□□ 0.66
LRRC58Q96CX6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRC58Q96CX6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 SLC7A5P2-201ENST00000553010 536 ntBASIC19.15■□□□□ 0.66
LRRC58Q96CX6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 AL358852.1-201ENST00000623174 1268 ntBASIC19.15■□□□□ 0.66
LRRC58Q96CX6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC58Q96CX6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC58Q96CX6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC58Q96CX6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
LRRC58Q96CX6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC58Q96CX6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC58Q96CX6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC58Q96CX6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.13■□□□□ 0.65
LRRC58Q96CX6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC58Q96CX6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 AL031432.3-201ENST00000607698 485 ntBASIC19.12■□□□□ 0.65
LRRC58Q96CX6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC58Q96CX6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms