Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APH1AQ96BI3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
APH1AQ96BI3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
APH1AQ96BI3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.84■□□□□ 0.45
APH1AQ96BI3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.84■□□□□ 0.45
APH1AQ96BI3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.84■□□□□ 0.45
APH1AQ96BI3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.84■□□□□ 0.45
APH1AQ96BI3 PNMA6B-201ENST00000538162 1200 ntBASIC17.84■□□□□ 0.45
APH1AQ96BI3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.84■□□□□ 0.45
APH1AQ96BI3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
APH1AQ96BI3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APH1AQ96BI3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APH1AQ96BI3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
APH1AQ96BI3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
APH1AQ96BI3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
APH1AQ96BI3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.83■□□□□ 0.45
APH1AQ96BI3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 AL390719.1-204ENST00000412397 1219 ntBASIC17.83■□□□□ 0.44
APH1AQ96BI3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APH1AQ96BI3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
APH1AQ96BI3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APH1AQ96BI3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
APH1AQ96BI3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms