Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
USP9XQ93008 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.72■□□□□ 0.43
USP9XQ93008 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.72■□□□□ 0.43
USP9XQ93008 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.72■□□□□ 0.43
USP9XQ93008 KRT18P16-201ENST00000510337 1294 ntBASIC17.72■□□□□ 0.43
USP9XQ93008 EGLN1P1-201ENST00000531623 762 ntBASIC17.72■□□□□ 0.43
USP9XQ93008 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.72■□□□□ 0.43
USP9XQ93008 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP9XQ93008 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
USP9XQ93008 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.71■□□□□ 0.43
USP9XQ93008 AL445675.2-201ENST00000620291 557 ntBASIC17.71■□□□□ 0.43
USP9XQ93008 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
USP9XQ93008 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.71■□□□□ 0.43
USP9XQ93008 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
USP9XQ93008 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.71■□□□□ 0.43
USP9XQ93008 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.71■□□□□ 0.43
USP9XQ93008 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP9XQ93008 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.71■□□□□ 0.43
USP9XQ93008 KRT8P10-201ENST00000450021 1447 ntBASIC17.7■□□□□ 0.42
USP9XQ93008 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.7■□□□□ 0.42
USP9XQ93008 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 AC091390.4-202ENST00000476426 537 ntBASIC17.7■□□□□ 0.42
USP9XQ93008 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.7■□□□□ 0.42
USP9XQ93008 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
USP9XQ93008 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.7■□□□□ 0.42
USP9XQ93008 AC139530.3-201ENST00000620344 690 ntBASIC17.7■□□□□ 0.42
USP9XQ93008 AC011558.1-201ENST00000623459 338 ntBASIC17.7■□□□□ 0.42
USP9XQ93008 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.7■□□□□ 0.42
USP9XQ93008 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.7■□□□□ 0.42
USP9XQ93008 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.7■□□□□ 0.42
USP9XQ93008 AP000347.1-202ENST00000435868 847 ntBASIC17.7■□□□□ 0.42
USP9XQ93008 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.7■□□□□ 0.42
USP9XQ93008 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP9XQ93008 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP9XQ93008 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP9XQ93008 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
USP9XQ93008 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP9XQ93008 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.69■□□□□ 0.42
USP9XQ93008 AC092647.4-201ENST00000457211 535 ntBASIC17.69■□□□□ 0.42
USP9XQ93008 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.69■□□□□ 0.42
USP9XQ93008 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.69■□□□□ 0.42
USP9XQ93008 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.69■□□□□ 0.42
USP9XQ93008 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP9XQ93008 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
USP9XQ93008 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
USP9XQ93008 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.69■□□□□ 0.42
USP9XQ93008 FDX1P1-201ENST00000449115 551 ntBASIC17.69■□□□□ 0.42
USP9XQ93008 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.69■□□□□ 0.42
USP9XQ93008 LINC02084-201ENST00000606069 1096 ntBASIC17.69■□□□□ 0.42
USP9XQ93008 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP9XQ93008 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.69■□□□□ 0.42
USP9XQ93008 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
USP9XQ93008 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.68■□□□□ 0.42
USP9XQ93008 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.68■□□□□ 0.42
USP9XQ93008 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.68■□□□□ 0.42
USP9XQ93008 B3GAT3P1-201ENST00000471720 806 ntBASIC17.68■□□□□ 0.42
USP9XQ93008 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.68■□□□□ 0.42
USP9XQ93008 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 CR392000.1-201ENST00000624770 1228 ntBASIC17.68■□□□□ 0.42
USP9XQ93008 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
USP9XQ93008 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP9XQ93008 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.68■□□□□ 0.42
USP9XQ93008 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.68■□□□□ 0.42
USP9XQ93008 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.68■□□□□ 0.42
USP9XQ93008 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
USP9XQ93008 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP9XQ93008 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.67■□□□□ 0.42
USP9XQ93008 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.67■□□□□ 0.42
USP9XQ93008 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.67■□□□□ 0.42
USP9XQ93008 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms