Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP13Q92995 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP13Q92995 AC006557.6-201ENST00000623071 864 ntBASIC21.12■□□□□ 0.97
USP13Q92995 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
USP13Q92995 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
USP13Q92995 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
USP13Q92995 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP13Q92995 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.11■□□□□ 0.97
USP13Q92995 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP13Q92995 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP13Q92995 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP13Q92995 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.11■□□□□ 0.97
USP13Q92995 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
USP13Q92995 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.11■□□□□ 0.97
USP13Q92995 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.11■□□□□ 0.97
USP13Q92995 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.11■□□□□ 0.97
USP13Q92995 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.11■□□□□ 0.97
USP13Q92995 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
USP13Q92995 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP13Q92995 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP13Q92995 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.11■□□□□ 0.97
USP13Q92995 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP13Q92995 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
USP13Q92995 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP13Q92995 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.1■□□□□ 0.97
USP13Q92995 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.1■□□□□ 0.97
USP13Q92995 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.1■□□□□ 0.97
USP13Q92995 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 AC120498.8-201ENST00000614275 531 ntBASIC21.1■□□□□ 0.97
USP13Q92995 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.1■□□□□ 0.97
USP13Q92995 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.1■□□□□ 0.97
USP13Q92995 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP13Q92995 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.1■□□□□ 0.97
USP13Q92995 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
USP13Q92995 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP13Q92995 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP13Q92995 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.09■□□□□ 0.97
USP13Q92995 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP13Q92995 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.09■□□□□ 0.97
USP13Q92995 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP13Q92995 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP13Q92995 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
USP13Q92995 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP13Q92995 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.09■□□□□ 0.97
USP13Q92995 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.09■□□□□ 0.97
USP13Q92995 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP13Q92995 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
USP13Q92995 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
USP13Q92995 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP13Q92995 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.09■□□□□ 0.97
USP13Q92995 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
USP13Q92995 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP13Q92995 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP13Q92995 AC005229.4-201ENST00000610085 2198 ntBASIC21.09■□□□□ 0.97
USP13Q92995 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP13Q92995 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP13Q92995 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP13Q92995 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP13Q92995 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP13Q92995 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP13Q92995 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.08■□□□□ 0.97
USP13Q92995 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP13Q92995 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP13Q92995 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.08■□□□□ 0.97
USP13Q92995 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.08■□□□□ 0.97
USP13Q92995 Z99916.2-201ENST00000604037 246 ntBASIC21.08■□□□□ 0.97
USP13Q92995 MTDHP1-201ENST00000605323 784 ntBASIC21.08■□□□□ 0.97
USP13Q92995 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
USP13Q92995 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.08■□□□□ 0.97
USP13Q92995 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.08■□□□□ 0.96
USP13Q92995 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
USP13Q92995 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP13Q92995 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP13Q92995 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP13Q92995 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP13Q92995 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
USP13Q92995 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.07■□□□□ 0.96
USP13Q92995 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP13Q92995 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP13Q92995 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
USP13Q92995 MIR718-201ENST00000390190 70 ntBASIC21.07■□□□□ 0.96
USP13Q92995 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP13Q92995 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.07■□□□□ 0.96
USP13Q92995 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.07■□□□□ 0.96
USP13Q92995 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.07■□□□□ 0.96
USP13Q92995 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
USP13Q92995 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.07■□□□□ 0.96
USP13Q92995 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
USP13Q92995 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP13Q92995 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP13Q92995 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP13Q92995 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP13Q92995 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms