Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.56■■□□□ 1.04
SHC3Q92529 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SHC3Q92529 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
SHC3Q92529 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SHC3Q92529 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SHC3Q92529 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SHC3Q92529 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SHC3Q92529 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC3Q92529 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.56■■□□□ 1.04
SHC3Q92529 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.55■■□□□ 1.04
SHC3Q92529 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC3Q92529 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SHC3Q92529 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC3Q92529 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.55■■□□□ 1.04
SHC3Q92529 AF201337.1-201ENST00000520239 748 ntBASIC21.55■■□□□ 1.04
SHC3Q92529 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SHC3Q92529 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.55■■□□□ 1.04
SHC3Q92529 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.55■■□□□ 1.04
SHC3Q92529 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHC3Q92529 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC3Q92529 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC3Q92529 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SHC3Q92529 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
SHC3Q92529 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SHC3Q92529 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.54■■□□□ 1.04
SHC3Q92529 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.54■■□□□ 1.04
SHC3Q92529 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.54■■□□□ 1.04
SHC3Q92529 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.54■■□□□ 1.04
SHC3Q92529 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.54■■□□□ 1.04
SHC3Q92529 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC3Q92529 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.54■■□□□ 1.04
SHC3Q92529 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC3Q92529 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.53■■□□□ 1.04
SHC3Q92529 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.53■■□□□ 1.04
SHC3Q92529 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC3Q92529 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.53■■□□□ 1.04
SHC3Q92529 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC3Q92529 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHC3Q92529 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.53■■□□□ 1.04
SHC3Q92529 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.53■■□□□ 1.04
SHC3Q92529 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.53■■□□□ 1.04
SHC3Q92529 AC105036.2-201ENST00000569468 176 ntBASIC21.53■■□□□ 1.04
SHC3Q92529 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SHC3Q92529 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SHC3Q92529 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC3Q92529 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHC3Q92529 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SHC3Q92529 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SHC3Q92529 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.52■■□□□ 1.04
SHC3Q92529 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 MKRN4P-201ENST00000444706 1521 ntBASIC21.52■■□□□ 1.04
SHC3Q92529 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.52■■□□□ 1.04
SHC3Q92529 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.52■■□□□ 1.04
SHC3Q92529 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.52■■□□□ 1.04
SHC3Q92529 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHC3Q92529 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.51■■□□□ 1.03
SHC3Q92529 AL691432.2-201ENST00000607222 2038 ntBASIC21.51■■□□□ 1.03
SHC3Q92529 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SHC3Q92529 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.51■■□□□ 1.03
SHC3Q92529 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SHC3Q92529 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.51■■□□□ 1.03
SHC3Q92529 C2orf69P4-201ENST00000565394 541 ntBASIC21.51■■□□□ 1.03
SHC3Q92529 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.51■■□□□ 1.03
SHC3Q92529 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.51■■□□□ 1.03
SHC3Q92529 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHC3Q92529 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.5■■□□□ 1.03
SHC3Q92529 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms