Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 KRT87P-202ENST00000534226 1464 ntBASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40AQ8WXH6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40AQ8WXH6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 RARRES2P11-201ENST00000635158 484 ntBASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 AC098818.2-201ENST00000564925 2320 ntBASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40AQ8WXH6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 AC006015.1-201ENST00000429970 570 ntBASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40AQ8WXH6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB40AQ8WXH6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.64■□□□□ 0.42
RAB40AQ8WXH6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB40AQ8WXH6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB40AQ8WXH6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RAB40AQ8WXH6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB40AQ8WXH6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms