Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 AC099778.1-201ENST00000568593 1911 ntBASIC20.41■□□□□ 0.86
PTCD2Q8WV60 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTCD2Q8WV60 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTCD2Q8WV60 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCD2Q8WV60 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTCD2Q8WV60 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCD2Q8WV60 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCD2Q8WV60 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCD2Q8WV60 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTCD2Q8WV60 CYP21A1P-202ENST00000354927 1481 ntBASIC20.39■□□□□ 0.85
PTCD2Q8WV60 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 AL356652.1-201ENST00000615962 565 ntBASIC20.39■□□□□ 0.85
PTCD2Q8WV60 AC100791.3-201ENST00000617619 330 ntBASIC20.39■□□□□ 0.85
PTCD2Q8WV60 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PTCD2Q8WV60 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.38■□□□□ 0.85
PTCD2Q8WV60 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCD2Q8WV60 KRT17P1-201ENST00000399211 1546 ntBASIC20.37■□□□□ 0.85
PTCD2Q8WV60 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCD2Q8WV60 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
PTCD2Q8WV60 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms