Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCHCR1Q8TD31 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 IKBKGP1-201ENST00000612193 1073 ntBASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCHCR1Q8TD31 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 BID-214ENST00000617586 542 ntTSL 5 BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CCHCR1Q8TD31 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCHCR1Q8TD31 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 AC092437.1-201ENST00000624794 1048 ntBASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms