Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNAAF3Q8N9W5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 DPP3P2-201ENST00000416030 1696 ntBASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 AC006015.1-201ENST00000429970 570 ntBASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF3Q8N9W5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 CYP21A1P-202ENST00000354927 1481 ntBASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 DUX4L16-201ENST00000555130 1264 ntBASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 AC092666.2-201ENST00000613287 246 ntBASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 AL356652.1-201ENST00000615962 565 ntBASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 BID-214ENST00000617586 542 ntTSL 5 BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 AC087633.2-202ENST00000565166 1439 ntBASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.51■□□□□ 0.87
DNAAF3Q8N9W5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.5■□□□□ 0.87
DNAAF3Q8N9W5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF3Q8N9W5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 CNN2P6-201ENST00000439038 900 ntBASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.48■□□□□ 0.87
DNAAF3Q8N9W5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms