Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 ITM2C-210ENST00000620962 501 ntBASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF39Q8N4T4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 AC020907.5-201ENST00000624372 1936 ntBASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 DPP3P2-201ENST00000416030 1696 ntBASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF39Q8N4T4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 AC006557.6-201ENST00000623071 864 ntBASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF39Q8N4T4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 FAM201B-201ENST00000458407 597 ntBASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 AC008687.6-201ENST00000596318 630 ntBASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 AL031963.3-201ENST00000606441 850 ntBASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARHGEF39Q8N4T4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 PRORSD1P-201ENST00000295112 541 ntBASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms