Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 AC112907.3-201ENST00000577781 2400 ntBASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
CCDC146Q8IYE0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 PCDHAC2-203ENST00000615316 3011 ntBASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC146Q8IYE0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 AL162377.1-201ENST00000618844 1793 ntBASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 LINC01521-201ENST00000504184 1943 ntBASIC26.73■■□□□ 1.87
CCDC146Q8IYE0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC146Q8IYE0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC146Q8IYE0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CCDC146Q8IYE0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.7■■□□□ 1.87
CCDC146Q8IYE0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.7■■□□□ 1.87
CCDC146Q8IYE0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC26.7■■□□□ 1.87
CCDC146Q8IYE0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC146Q8IYE0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms