Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CRLF3Q8IUI8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 AIRN-201ENST00000601203 4374 ntBASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRLF3Q8IUI8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 AC061975.6-201ENST00000579045 1553 ntBASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CRLF3Q8IUI8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 AC053503.5-201ENST00000601508 636 ntBASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 AC125437.2-201ENST00000625180 2167 ntBASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 AL158211.5-201ENST00000623583 2518 ntBASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CRLF3Q8IUI8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 EEF1DP3-203ENST00000566025 782 ntBASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CRLF3Q8IUI8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 AC098818.2-201ENST00000564925 2320 ntBASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.03■□□□□ 0.8
CRLF3Q8IUI8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms