Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VRK2Q86Y07 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VRK2Q86Y07 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VRK2Q86Y07 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VRK2Q86Y07 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VRK2Q86Y07 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.65■□□□□ 0.58
VRK2Q86Y07 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VRK2Q86Y07 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.64■□□□□ 0.58
VRK2Q86Y07 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VRK2Q86Y07 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VRK2Q86Y07 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VRK2Q86Y07 PGM5P4-201ENST00000421970 445 ntBASIC18.64■□□□□ 0.57
VRK2Q86Y07 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 AC006015.1-201ENST00000429970 570 ntBASIC18.64■□□□□ 0.57
VRK2Q86Y07 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 AL162430.1-201ENST00000480705 870 ntBASIC18.64■□□□□ 0.57
VRK2Q86Y07 AL162412.1-201ENST00000567129 965 ntBASIC18.64■□□□□ 0.57
VRK2Q86Y07 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.64■□□□□ 0.57
VRK2Q86Y07 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VRK2Q86Y07 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.64■□□□□ 0.57
VRK2Q86Y07 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 AC068338.2-201ENST00000563278 1430 ntBASIC18.63■□□□□ 0.57
VRK2Q86Y07 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VRK2Q86Y07 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VRK2Q86Y07 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VRK2Q86Y07 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VRK2Q86Y07 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VRK2Q86Y07 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VRK2Q86Y07 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VRK2Q86Y07 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.62■□□□□ 0.57
VRK2Q86Y07 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 RARRES2P4-201ENST00000514074 484 ntBASIC18.61■□□□□ 0.57
VRK2Q86Y07 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK2Q86Y07 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.61■□□□□ 0.57
VRK2Q86Y07 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms