Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 UNC93B2-201ENST00000285383 730 ntBASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 DUSP5P1-201ENST00000441325 1139 ntBASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 LINC01568-207ENST00000641790 1380 ntBASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 AC104076.2-201ENST00000448912 469 ntBASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13BQ7Z7G8 NBPF21P-201ENST00000425093 1451 ntBASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VPS13BQ7Z7G8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 KRT126P-201ENST00000549467 1181 ntBASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 AC110285.5-201ENST00000611501 352 ntBASIC12.52□□□□□ -0.41
VPS13BQ7Z7G8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 AL355355.2-201ENST00000442321 338 ntBASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 KRT18P56-201ENST00000507275 550 ntBASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 AL390955.1-201ENST00000428694 934 ntBASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms