Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NBPF21P-201ENST00000425093 1451 ntBASIC16.94■□□□□ 0.3
VPS13CQ709C8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS13CQ709C8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VPS13CQ709C8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 EP400NL-214ENST00000641289 2402 ntBASIC16.93■□□□□ 0.3
VPS13CQ709C8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
VPS13CQ709C8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13CQ709C8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 AC127496.7-201ENST00000625110 1798 ntBASIC16.92■□□□□ 0.3
VPS13CQ709C8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 AC104076.2-201ENST00000448912 469 ntBASIC16.92■□□□□ 0.3
VPS13CQ709C8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS13CQ709C8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13CQ709C8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 AL355355.2-201ENST00000442321 338 ntBASIC16.91■□□□□ 0.3
VPS13CQ709C8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS13CQ709C8 INGX-201ENST00000359239 846 ntBASIC16.91■□□□□ 0.3
VPS13CQ709C8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13CQ709C8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13CQ709C8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS13CQ709C8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13CQ709C8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS13CQ709C8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13CQ709C8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS13CQ709C8 AL137013.1-201ENST00000432946 1228 ntBASIC16.9■□□□□ 0.3
VPS13CQ709C8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS13CQ709C8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13CQ709C8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13CQ709C8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13CQ709C8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS13CQ709C8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VPS13CQ709C8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VPS13CQ709C8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
VPS13CQ709C8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
VPS13CQ709C8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.89■□□□□ 0.3
VPS13CQ709C8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VPS13CQ709C8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS13CQ709C8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS13CQ709C8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS13CQ709C8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS13CQ709C8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.89■□□□□ 0.29
VPS13CQ709C8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS13CQ709C8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.89■□□□□ 0.29
VPS13CQ709C8 AC087388.1-201ENST00000571370 1112 ntBASIC16.89■□□□□ 0.29
VPS13CQ709C8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS13CQ709C8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS13CQ709C8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms