Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 KRT8P36-201ENST00000489121 1440 ntBASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 POM121L13P-201ENST00000422362 380 ntBASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 RPPH1-201ENST00000516869 333 ntBASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 AC005829.2-201ENST00000571422 1056 ntBASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 RN7SL471P-201ENST00000580476 299 ntBASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF17Q5VTA0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF17Q5VTA0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF17Q5VTA0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.2■□□□□ 0.66
PRAMEF17Q5VTA0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms