Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF1Q5TC12 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.45■□□□□ 0.38
ATPAF1Q5TC12 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF1Q5TC12 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
ATPAF1Q5TC12 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 AC016769.1-201ENST00000409132 1010 ntBASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 UBE2DNL-204ENST00000602536 740 ntBASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 MYCNOS-205ENST00000641950 531 ntBASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 AC018445.3-201ENST00000624177 1945 ntBASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF1Q5TC12 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 AC243732.1-201ENST00000612648 864 ntBASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF1Q5TC12 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATPAF1Q5TC12 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 BX323043.1-201ENST00000641006 1765 ntBASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms