Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 HTR7P1-201ENST00000538670 1336 ntBASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 REXO1L12P-201ENST00000622156 912 ntBASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 AC097493.4-201ENST00000641197 219 ntBASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 EP400NL-214ENST00000641289 2402 ntBASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 FBXW4P1-201ENST00000426721 2239 ntBASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC18Q5T9S5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 BID-212ENST00000614949 1988 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
CCDC18Q5T9S5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 AC121338.2-201ENST00000622535 1744 ntBASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC18Q5T9S5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC18Q5T9S5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC18Q5T9S5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CCDC18Q5T9S5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC31.35■■■□□ 2.61
CCDC18Q5T9S5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CCDC18Q5T9S5 CD177P1-201ENST00000606252 935 ntBASIC31.35■■■□□ 2.61
CCDC18Q5T9S5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 PNN-205ENST00000556530 601 ntTSL 2 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 AP003071.4-201ENST00000562276 1284 ntBASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CCDC18Q5T9S5 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.33■■■□□ 2.61
CCDC18Q5T9S5 NUDT16P1-203ENST00000513809 620 ntBASIC31.33■■■□□ 2.61
CCDC18Q5T9S5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31.33■■■□□ 2.61
CCDC18Q5T9S5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC18Q5T9S5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.33■■■□□ 2.61
CCDC18Q5T9S5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.33■■■□□ 2.61
CCDC18Q5T9S5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC18Q5T9S5 KRT8P20-201ENST00000423953 1409 ntBASIC31.32■■■□□ 2.6
CCDC18Q5T9S5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC18Q5T9S5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms