Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 KRT19P1-201ENST00000405746 1186 ntBASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6AP1LQ52LC2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP6AP1LQ52LC2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP6AP1LQ52LC2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 AC097381.1-201ENST00000429019 1296 ntBASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6AP1LQ52LC2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6AP1LQ52LC2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms