Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 AL355472.2-201ENST00000422958 438 ntBASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP13A4Q4VNC1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 AC007322.1-201ENST00000426983 750 ntBASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 CYP2T1P-201ENST00000432607 1285 ntBASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP13A4Q4VNC1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP13A4Q4VNC1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.02■□□□□ 0.95
ATP13A4Q4VNC1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 MCRIP2P1-201ENST00000394346 511 ntBASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A4Q4VNC1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 GAS2L1P2-201ENST00000436355 1356 ntBASIC21■□□□□ 0.95
ATP13A4Q4VNC1 LBX2-AS1-202ENST00000603175 2083 ntBASIC21■□□□□ 0.95
ATP13A4Q4VNC1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 PGM5P4-201ENST00000421970 445 ntBASIC21■□□□□ 0.95
ATP13A4Q4VNC1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 AC231657.2-201ENST00000624556 255 ntBASIC21■□□□□ 0.95
ATP13A4Q4VNC1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 AC125437.2-201ENST00000625180 2167 ntBASIC21■□□□□ 0.95
ATP13A4Q4VNC1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATP13A4Q4VNC1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms