Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN20Q4JDL3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 SLC29A4P1-201ENST00000398760 971 ntBASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN20Q4JDL3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 AC098934.4-201ENST00000564127 592 ntBASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 AL138781.1-201ENST00000566567 1274 ntBASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 AC104771.1-201ENST00000603335 964 ntBASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 AC092118.2-201ENST00000613495 667 ntBASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 AL109923.1-201ENST00000618799 583 ntBASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PTPN20Q4JDL3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 DUSP5P2-201ENST00000426873 1033 ntBASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 PCDHAC2-203ENST00000615316 3011 ntBASIC21.23■□□□□ 0.99
PTPN20Q4JDL3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN20Q4JDL3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms