Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 SRP21YKL122C 504 nt-1.11□□□□□ -2.59
VPS13Q07878 ACA1YER045C 1470 nt-1.11□□□□□ -2.59
VPS13Q07878 BFR1YOR198C 1413 nt-1.11□□□□□ -2.59
VPS13Q07878 SPO23YBR250W 1572 nt-1.11□□□□□ -2.59
VPS13Q07878 RPL9BYNL067W 576 nt-1.11□□□□□ -2.59
VPS13Q07878 YNL211CYNL211C 261 nt-1.11□□□□□ -2.59
VPS13Q07878 NUT2YPR168W 474 nt-1.11□□□□□ -2.59
VPS13Q07878 YGL123C-AYGL123C-A 231 nt-1.12□□□□□ -2.59
VPS13Q07878 YOR345CYOR345C 351 nt-1.12□□□□□ -2.59
VPS13Q07878 UPF3YGR072W 1164 nt-1.12□□□□□ -2.59
VPS13Q07878 CMC1YKL137W 336 nt-1.12□□□□□ -2.59
VPS13Q07878 NUP82YJL061W 2142 nt-1.12□□□□□ -2.59
VPS13Q07878 OLI1Q0130 231 nt-1.13□□□□□ -2.59
VPS13Q07878 EMC2YJR088C 879 nt-1.13□□□□□ -2.59
VPS13Q07878 DIE2YGR227W 1578 nt-1.13□□□□□ -2.59
VPS13Q07878 FAR7YFR008W 666 nt-1.13□□□□□ -2.59
VPS13Q07878 YJL156W-AYJL156W-A 222 nt-1.13□□□□□ -2.59
VPS13Q07878 YOR394C-AYOR394C-A 168 nt-1.13□□□□□ -2.59
VPS13Q07878 RNH202YDR279W 1053 nt-1.14□□□□□ -2.59
VPS13Q07878 YHR022CYHR022C 771 nt-1.14□□□□□ -2.59
VPS13Q07878 ECM9YKR004C 1134 nt-1.14□□□□□ -2.59
VPS13Q07878 MRPL24YMR193W 777 nt-1.14□□□□□ -2.59
VPS13Q07878 EPT1YHR123W 1176 nt-1.15□□□□□ -2.59
VPS13Q07878 YBR126W-BYBR126W-B 144 nt-1.15□□□□□ -2.59
VPS13Q07878 YLL032CYLL032C 2478 nt-1.16□□□□□ -2.6
VPS13Q07878 YDR029WYDR029W 315 nt-1.17□□□□□ -2.6
VPS13Q07878 YGL118CYGL118C 438 nt-1.17□□□□□ -2.6
VPS13Q07878 RCO1YMR075W 2055 nt-1.17□□□□□ -2.6
VPS13Q07878 RPI1YIL119C 1224 nt-1.18□□□□□ -2.6
VPS13Q07878 RPS25BYLR333C 327 nt-1.18□□□□□ -2.6
VPS13Q07878 YMR181CYMR181C 465 nt-1.18□□□□□ -2.6
VPS13Q07878 NOP10YHR072W-A 177 nt-1.19□□□□□ -2.6
VPS13Q07878 MRP49YKL167C 414 nt-1.19□□□□□ -2.6
VPS13Q07878 YBR221W-AYBR221W-A 105 nt-1.19□□□□□ -2.6
VPS13Q07878 YIL071W-AYIL071W-A 477 nt-1.2□□□□□ -2.6
VPS13Q07878 HSK3YKL138C-A 210 nt-1.2□□□□□ -2.6
VPS13Q07878 RAD10YML095C 633 nt-1.2□□□□□ -2.6
VPS13Q07878 RPS16AYMR143W 432 nt-1.2□□□□□ -2.6
VPS13Q07878 YDL007C-AYDL007C-A 258 nt-1.21□□□□□ -2.6
VPS13Q07878 PHO92YDR374C 921 nt-1.21□□□□□ -2.6
VPS13Q07878 HUR1YGL168W 333 nt-1.21□□□□□ -2.6
VPS13Q07878 YBL028CYBL028C 321 nt-1.21□□□□□ -2.6
VPS13Q07878 APQ13YJL075C 417 nt-1.22□□□□□ -2.6
VPS13Q07878 YNL143CYNL143C 393 nt-1.22□□□□□ -2.6
VPS13Q07878 tY(GUA)QtY(GUA)Q 84 nt-1.22□□□□□ -2.61
VPS13Q07878 ARL3YPL051W 597 nt-1.22□□□□□ -2.61
VPS13Q07878 LCD1YDR499W 2244 nt-1.23□□□□□ -2.61
VPS13Q07878 MAM33YIL070C 801 nt-1.23□□□□□ -2.61
VPS13Q07878 YOR105WYOR105W 327 nt-1.23□□□□□ -2.61
VPS13Q07878 YDR371C-AYDR371C-A 105 nt-1.23□□□□□ -2.61
VPS13Q07878 YJR079WYJR079W 330 nt-1.23□□□□□ -2.61
VPS13Q07878 YOR203WYOR203W 354 nt-1.24□□□□□ -2.61
VPS13Q07878 AI3Q0060 1248 nt-1.25□□□□□ -2.61
VPS13Q07878 COG7YGL005C 840 nt-1.25□□□□□ -2.61
VPS13Q07878 AEP3YPL005W 1821 nt-1.25□□□□□ -2.61
VPS13Q07878 YMR086C-AYMR086C-A 339 nt-1.26□□□□□ -2.61
VPS13Q07878 YIL066W-AYIL066W-A 444 nt-1.27□□□□□ -2.61
VPS13Q07878 RPC25YKL144C 639 nt-1.27□□□□□ -2.61
VPS13Q07878 YPL080CYPL080C 327 nt-1.27□□□□□ -2.61
VPS13Q07878 AFB1YLR040C 675 nt-1.29□□□□□ -2.62
VPS13Q07878 RTC6YPL183W-A 282 nt-1.29□□□□□ -2.62
VPS13Q07878 IZH4YOL101C 939 nt-1.29□□□□□ -2.62
VPS13Q07878 RPF1YHR088W 888 nt-1.29□□□□□ -2.62
VPS13Q07878 RMD6YEL072W 696 nt-1.3□□□□□ -2.62
VPS13Q07878 YMR173W-AYMR173W-A 1185 nt-1.3□□□□□ -2.62
VPS13Q07878 DDR48YMR173W 1293 nt-1.3□□□□□ -2.62
VPS13Q07878 ERV14YGL054C 417 nt-1.3□□□□□ -2.62
VPS13Q07878 FYV10YIL097W 1551 nt-1.3□□□□□ -2.62
VPS13Q07878 YGR265WYGR265W 411 nt-1.31□□□□□ -2.62
VPS13Q07878 NEJ1YLR265C 1029 nt-1.31□□□□□ -2.62
VPS13Q07878 YOL035CYOL035C 303 nt-1.31□□□□□ -2.62
VPS13Q07878 NGL1YOL042W 1092 nt-1.31□□□□□ -2.62
VPS13Q07878 PCF11YDR228C 1881 nt-1.32□□□□□ -2.62
VPS13Q07878 VPS20YMR077C 666 nt-1.34□□□□□ -2.62
VPS13Q07878 RFA3YJL173C 369 nt-1.34□□□□□ -2.62
VPS13Q07878 tP(UGG)QtP(UGG)Q 72 nt-1.35□□□□□ -2.62
VPS13Q07878 YIL032CYIL032C 357 nt-1.35□□□□□ -2.62
VPS13Q07878 YNL146WYNL146W 303 nt-1.35□□□□□ -2.62
VPS13Q07878 YBR121C-AYBR121C-A 159 nt-1.35□□□□□ -2.62
VPS13Q07878 AME1YBR211C 975 nt-1.35□□□□□ -2.63
VPS13Q07878 COY1YKL179C 2040 nt-1.35□□□□□ -2.63
VPS13Q07878 UPS1YLR193C 528 nt-1.36□□□□□ -2.63
VPS13Q07878 tA(UGC)QtA(UGC)Q 76 nt-1.36□□□□□ -2.63
VPS13Q07878 YML007C-AYML007C-A 111 nt-1.37□□□□□ -2.63
VPS13Q07878 PHO80YOL001W 882 nt-1.37□□□□□ -2.63
VPS13Q07878 YCR007CYCR007C 720 nt-1.37□□□□□ -2.63
VPS13Q07878 YCL002CYCL002C 792 nt-1.37□□□□□ -2.63
VPS13Q07878 YOL160WYOL160W 342 nt-1.37□□□□□ -2.63
VPS13Q07878 CSM4YPL200W 471 nt-1.38□□□□□ -2.63
VPS13Q07878 DXO1YDR370C 1329 nt-1.39□□□□□ -2.63
VPS13Q07878 YGL204CYGL204C 306 nt-1.39□□□□□ -2.63
VPS13Q07878 YBL100W-AYBL100W-A 1317 nt-1.39□□□□□ -2.63
VPS13Q07878 IRC2YDR112W 309 nt-1.4□□□□□ -2.63
VPS13Q07878 ATC1YDR184C 885 nt-1.4□□□□□ -2.63
VPS13Q07878 YIL089WYIL089W 618 nt-1.4□□□□□ -2.63
VPS13Q07878 BSC3YLR465C 309 nt-1.4□□□□□ -2.63
VPS13Q07878 ECL1YGR146C 636 nt-1.41□□□□□ -2.63
VPS13Q07878 PRM6YML047C 1059 nt-1.41□□□□□ -2.63
VPS13Q07878 RTR2YDR066C 591 nt-1.41□□□□□ -2.64
VPS13Q07878 YHR138CYHR138C 345 nt-1.41□□□□□ -2.64
Retrieved 100 of 7,029 protein–RNA pairs in 34.9 ms