Protein–RNA interactions for Protein: Q04172

SHE9, Sensitive to high expression protein 9, mitochondrial, yeastyeast

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE9Q04172 RPS17AYML024W 411 nt2.58□□□□□ -2
SHE9Q04172 YMR194C-AYMR194C-A 225 nt2.58□□□□□ -2
SHE9Q04172 YMR321CYMR321C 318 nt2.58□□□□□ -2
SHE9Q04172 YOR015WYOR015W 360 nt2.58□□□□□ -2
SHE9Q04172 YOR055WYOR055W 435 nt2.58□□□□□ -2
SHE9Q04172 YCL046WYCL046W 324 nt2.58□□□□□ -2
SHE9Q04172 GIP3YPL137C 3831 nt2.57□□□□□ -2
SHE9Q04172 YLR012CYLR012C 300 nt2.57□□□□□ -2
SHE9Q04172 YLR154W-AYLR154W-A 186 nt2.57□□□□□ -2
SHE9Q04172 RAV1YJR033C 4074 nt2.57□□□□□ -2
SHE9Q04172 PSD2YGR170W 3417 nt2.56□□□□□ -2
SHE9Q04172 CLN3YAL040C 1743 nt2.56□□□□□ -2
SHE9Q04172 SGM1YJR134C 2124 nt2.56□□□□□ -2
SHE9Q04172 SGS1YMR190C 4344 nt2.56□□□□□ -2
SHE9Q04172 SVL3YPL032C 2478 nt2.56□□□□□ -2
SHE9Q04172 KRE33YNL132W 3171 nt2.56□□□□□ -2
SHE9Q04172 SPF1YEL031W 3648 nt2.55□□□□□ -2
SHE9Q04172 YHR071C-AYHR071C-A 321 nt2.55□□□□□ -2
SHE9Q04172 PDE2YOR360C 1581 nt2.55□□□□□ -2
SHE9Q04172 ORC2YBR060C 1863 nt2.55□□□□□ -2
SHE9Q04172 YCR102W-AYCR102W-A 198 nt2.54□□□□□ -2
SHE9Q04172 tF(GAA)QtF(GAA)Q 75 nt2.54□□□□□ -2
SHE9Q04172 ISD11YER048W-A 285 nt2.54□□□□□ -2
SHE9Q04172 KTI11YBL071W-A 249 nt2.54□□□□□ -2
SHE9Q04172 YOR302WYOR302W 78 nt2.54□□□□□ -2
SHE9Q04172 VPS13YLL040C 9435 nt2.53□□□□□ -2
SHE9Q04172 YLR294CYLR294C 330 nt2.53□□□□□ -2
SHE9Q04172 TRL1YJL087C 2484 nt2.52□□□□□ -2.01
SHE9Q04172 TFC8YPL007C 1767 nt2.52□□□□□ -2.01
SHE9Q04172 ZRG17YNR039C 1818 nt2.52□□□□□ -2.01
SHE9Q04172 VPS8YAL002W 3825 nt2.51□□□□□ -2.01
SHE9Q04172 YDR003W-AYDR003W-A 123 nt2.51□□□□□ -2.01
SHE9Q04172 MPT5YGL178W 2580 nt2.51□□□□□ -2.01
SHE9Q04172 CHC1YGL206C 4962 nt2.5□□□□□ -2.01
SHE9Q04172 STE11YLR362W 2154 nt2.5□□□□□ -2.01
SHE9Q04172 VPS54YDR027C 2670 nt2.5□□□□□ -2.01
SHE9Q04172 YDR341CYDR341C 1824 nt2.5□□□□□ -2.01
SHE9Q04172 YOR011W-AYOR011W-A 207 nt2.5□□□□□ -2.01
SHE9Q04172 SKP2YNL311C 2292 nt2.49□□□□□ -2.01
SHE9Q04172 SIR3YLR442C 2937 nt2.49□□□□□ -2.01
SHE9Q04172 YJL182CYJL182C 318 nt2.49□□□□□ -2.01
SHE9Q04172 COX14YML129C 213 nt2.49□□□□□ -2.01
SHE9Q04172 CDC60YPL160W 3273 nt2.49□□□□□ -2.01
SHE9Q04172 NOP14YDL148C 2433 nt2.49□□□□□ -2.01
SHE9Q04172 DCP2YNL118C 2913 nt2.48□□□□□ -2.01
SHE9Q04172 ZIP1YDR285W 2628 nt2.48□□□□□ -2.01
SHE9Q04172 PHO2YDL106C 1680 nt2.48□□□□□ -2.01
SHE9Q04172 YEF3YLR249W 3135 nt2.48□□□□□ -2.01
SHE9Q04172 YDL185C-AYDL185C-A 228 nt2.48□□□□□ -2.01
SHE9Q04172 TIM9YEL020W-A 264 nt2.48□□□□□ -2.01
SHE9Q04172 NIP100YPL174C 2607 nt2.47□□□□□ -2.01
SHE9Q04172 SRP14YDL092W 441 nt2.47□□□□□ -2.01
SHE9Q04172 YPR092WYPR092W 306 nt2.47□□□□□ -2.01
SHE9Q04172 YOR343W-BYOR343W-B 5313 nt2.47□□□□□ -2.01
SHE9Q04172 SPC98YNL126W 2541 nt2.46□□□□□ -2.01
SHE9Q04172 AI5_ALPHAQ0070 1893 nt2.46□□□□□ -2.02
SHE9Q04172 YRB1YDR002W 606 nt2.46□□□□□ -2.02
SHE9Q04172 tC(GCA)BtC(GCA)B 72 nt2.46□□□□□ -2.02
SHE9Q04172 tC(GCA)GtC(GCA)G 72 nt2.46□□□□□ -2.02
SHE9Q04172 tC(GCA)P1tC(GCA)P1 72 nt2.46□□□□□ -2.02
SHE9Q04172 tC(GCA)P2tC(GCA)P2 72 nt2.46□□□□□ -2.02
SHE9Q04172 YKR075W-AYKR075W-A 270 nt2.46□□□□□ -2.02
SHE9Q04172 RRT15YLR162W-A 189 nt2.46□□□□□ -2.02
SHE9Q04172 YBL012CYBL012C 402 nt2.46□□□□□ -2.02
SHE9Q04172 YLR466C-BYLR466C-B 117 nt2.46□□□□□ -2.02
SHE9Q04172 YOL160WYOL160W 342 nt2.46□□□□□ -2.02
SHE9Q04172 BRP1YGL007W 378 nt2.45□□□□□ -2.02
SHE9Q04172 YIL156W-BYIL156W-B 222 nt2.45□□□□□ -2.02
SHE9Q04172 SYH1YPL105C 2550 nt2.45□□□□□ -2.02
SHE9Q04172 YOL098CYOL098C 3114 nt2.44□□□□□ -2.02
SHE9Q04172 NAM7YMR080C 2916 nt2.44□□□□□ -2.02
SHE9Q04172 YGR151CYGR151C 336 nt2.44□□□□□ -2.02
SHE9Q04172 YHR032W-AYHR032W-A 180 nt2.44□□□□□ -2.02
SHE9Q04172 VPS55YJR044C 423 nt2.44□□□□□ -2.02
SHE9Q04172 PET309YLR067C 2898 nt2.44□□□□□ -2.02
SHE9Q04172 PHO91YNR013C 2685 nt2.44□□□□□ -2.02
SHE9Q04172 MAK10YEL053C 2202 nt2.44□□□□□ -2.02
SHE9Q04172 YER088C-AYER088C-A 324 nt2.43□□□□□ -2.02
SHE9Q04172 MBB1YJL199C 327 nt2.43□□□□□ -2.02
SHE9Q04172 COA4YLR218C 453 nt2.43□□□□□ -2.02
SHE9Q04172 SAS3YBL052C 2496 nt2.43□□□□□ -2.02
SHE9Q04172 MSC6YOR354C 2079 nt2.42□□□□□ -2.02
SHE9Q04172 RPL37BYDR500C 267 nt2.42□□□□□ -2.02
SHE9Q04172 RPS27BYHR021C 249 nt2.42□□□□□ -2.02
SHE9Q04172 YOR218CYOR218C 420 nt2.42□□□□□ -2.02
SHE9Q04172 RTT107YHR154W 3213 nt2.42□□□□□ -2.02
SHE9Q04172 SEC5YDR166C 2916 nt2.42□□□□□ -2.02
SHE9Q04172 TUS1YLR425W 3924 nt2.42□□□□□ -2.02
SHE9Q04172 IRA2YOL081W 9240 nt2.42□□□□□ -2.02
SHE9Q04172 UBP1YDL122W 2430 nt2.41□□□□□ -2.02
SHE9Q04172 ZIP2YGL249W 2115 nt2.41□□□□□ -2.02
SHE9Q04172 RLM1YPL089C 2031 nt2.41□□□□□ -2.02
SHE9Q04172 HSH155YMR288W 2916 nt2.41□□□□□ -2.02
SHE9Q04172 OLI1Q0130 231 nt2.41□□□□□ -2.02
SHE9Q04172 YMR242W-AYMR242W-A 90 nt2.41□□□□□ -2.02
SHE9Q04172 MSB1YOR188W 3414 nt2.41□□□□□ -2.02
SHE9Q04172 FKS3YMR306W 5358 nt2.41□□□□□ -2.02
SHE9Q04172 DNA2YHR164C 4569 nt2.41□□□□□ -2.02
SHE9Q04172 snR74snR74 88 nt2.4□□□□□ -2.03
SHE9Q04172 YEL014CYEL014C 306 nt2.4□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms