Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.23■□□□□ 0.99
USP46P62068 AC006128.1-201ENST00000624704 1661 ntBASIC21.23■□□□□ 0.99
USP46P62068 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP46P62068 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP46P62068 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
USP46P62068 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.23■□□□□ 0.99
USP46P62068 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP46P62068 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
USP46P62068 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP46P62068 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP46P62068 FP700111.2-201ENST00000619190 1892 ntBASIC21.22■□□□□ 0.99
USP46P62068 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP46P62068 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP46P62068 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP46P62068 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP46P62068 AL158047.1-201ENST00000445918 881 ntBASIC21.22■□□□□ 0.99
USP46P62068 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP46P62068 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP46P62068 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.22■□□□□ 0.99
USP46P62068 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP46P62068 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.22■□□□□ 0.99
USP46P62068 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP46P62068 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.21■□□□□ 0.99
USP46P62068 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.21■□□□□ 0.99
USP46P62068 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
USP46P62068 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
USP46P62068 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 AC142381.4-202ENST00000563973 229 ntBASIC21.21■□□□□ 0.99
USP46P62068 AC069544.1-201ENST00000609399 999 ntBASIC21.21■□□□□ 0.99
USP46P62068 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP46P62068 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
USP46P62068 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP46P62068 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.21■□□□□ 0.99
USP46P62068 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
USP46P62068 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.2■□□□□ 0.98
USP46P62068 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 KRT17P3-201ENST00000420566 1262 ntBASIC21.2■□□□□ 0.98
USP46P62068 POM121L13P-201ENST00000422362 380 ntBASIC21.2■□□□□ 0.98
USP46P62068 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.2■□□□□ 0.98
USP46P62068 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.2■□□□□ 0.98
USP46P62068 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.2■□□□□ 0.98
USP46P62068 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.2■□□□□ 0.98
USP46P62068 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.2■□□□□ 0.98
USP46P62068 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.2■□□□□ 0.98
USP46P62068 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP46P62068 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.2■□□□□ 0.98
USP46P62068 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.19■□□□□ 0.98
USP46P62068 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
USP46P62068 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP46P62068 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
USP46P62068 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP46P62068 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.19■□□□□ 0.98
USP46P62068 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.19■□□□□ 0.98
USP46P62068 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.19■□□□□ 0.98
USP46P62068 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.19■□□□□ 0.98
USP46P62068 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP46P62068 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
USP46P62068 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.19■□□□□ 0.98
USP46P62068 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.19■□□□□ 0.98
USP46P62068 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP46P62068 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP46P62068 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP46P62068 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
USP46P62068 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.18■□□□□ 0.98
USP46P62068 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms