Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UBE2NP61088 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.73■□□□□ 0.43
UBE2NP61088 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2NP61088 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBE2NP61088 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2NP61088 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
UBE2NP61088 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBE2NP61088 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2NP61088 AL121603.2-201ENST00000557373 2117 ntBASIC17.72■□□□□ 0.43
UBE2NP61088 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2NP61088 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2NP61088 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2NP61088 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2NP61088 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2NP61088 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.72■□□□□ 0.43
UBE2NP61088 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2NP61088 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2NP61088 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.72■□□□□ 0.43
UBE2NP61088 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
UBE2NP61088 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.71■□□□□ 0.43
UBE2NP61088 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.71■□□□□ 0.43
UBE2NP61088 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UBE2NP61088 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.71■□□□□ 0.43
UBE2NP61088 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.71■□□□□ 0.43
UBE2NP61088 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 RNA5SP413-201ENST00000516373 109 ntBASIC17.71■□□□□ 0.43
UBE2NP61088 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.71■□□□□ 0.43
UBE2NP61088 CD99P1-205ENST00000527459 561 ntBASIC17.71■□□□□ 0.43
UBE2NP61088 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.71■□□□□ 0.43
UBE2NP61088 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.71■□□□□ 0.43
UBE2NP61088 AC083880.1-201ENST00000608266 535 ntBASIC17.71■□□□□ 0.43
UBE2NP61088 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
UBE2NP61088 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
UBE2NP61088 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2NP61088 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
UBE2NP61088 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBE2NP61088 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBE2NP61088 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2NP61088 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
UBE2NP61088 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UBE2NP61088 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UBE2NP61088 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.69■□□□□ 0.42
UBE2NP61088 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.69■□□□□ 0.42
UBE2NP61088 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.69■□□□□ 0.42
UBE2NP61088 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.69■□□□□ 0.42
UBE2NP61088 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2NP61088 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2NP61088 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2NP61088 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UBE2NP61088 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBE2NP61088 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2NP61088 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2NP61088 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2NP61088 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2NP61088 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.68■□□□□ 0.42
UBE2NP61088 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2NP61088 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2NP61088 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2NP61088 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2NP61088 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBE2NP61088 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms