Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN20P56880 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN20P56880 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.45■□□□□ 0.54
CLDN20P56880 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN20P56880 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN20P56880 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN20P56880 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN20P56880 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN20P56880 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN20P56880 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN20P56880 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN20P56880 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN20P56880 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN20P56880 PLK5-205ENST00000642079 1969 ntBASIC18.44■□□□□ 0.54
CLDN20P56880 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN20P56880 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CLDN20P56880 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 AC069152.1-201ENST00000438030 544 ntBASIC18.44■□□□□ 0.54
CLDN20P56880 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CLDN20P56880 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN20P56880 AC092118.2-201ENST00000613495 667 ntBASIC18.44■□□□□ 0.54
CLDN20P56880 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN20P56880 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN20P56880 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN20P56880 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN20P56880 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLDN20P56880 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 LSM12P1-201ENST00000411836 588 ntBASIC18.43■□□□□ 0.54
CLDN20P56880 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLDN20P56880 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN20P56880 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN20P56880 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN20P56880 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN20P56880 AC133041.1-202ENST00000642053 222 ntBASIC18.43■□□□□ 0.54
CLDN20P56880 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN20P56880 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN20P56880 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN20P56880 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN20P56880 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CLDN20P56880 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN20P56880 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN20P56880 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN20P56880 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLDN20P56880 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN20P56880 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 KRT18P68-201ENST00000392293 1000 ntBASIC18.42■□□□□ 0.54
CLDN20P56880 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN20P56880 AC073210.2-201ENST00000430369 194 ntBASIC18.42■□□□□ 0.54
CLDN20P56880 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.42■□□□□ 0.54
CLDN20P56880 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN20P56880 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN20P56880 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN20P56880 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN20P56880 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN20P56880 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms