Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN8P56748 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN8P56748 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN8P56748 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLDN8P56748 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN8P56748 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN8P56748 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN8P56748 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN8P56748 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN8P56748 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN8P56748 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN8P56748 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLDN8P56748 CYP21A1P-202ENST00000354927 1481 ntBASIC19.18■□□□□ 0.66
CLDN8P56748 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN8P56748 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN8P56748 AL162412.1-201ENST00000567129 965 ntBASIC19.18■□□□□ 0.66
CLDN8P56748 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN8P56748 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN8P56748 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN8P56748 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN8P56748 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN8P56748 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN8P56748 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN8P56748 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLDN8P56748 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLDN8P56748 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.17■□□□□ 0.66
CLDN8P56748 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLDN8P56748 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN8P56748 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN8P56748 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN8P56748 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN8P56748 AC034268.1-201ENST00000441047 882 ntBASIC19.16■□□□□ 0.66
CLDN8P56748 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN8P56748 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN8P56748 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN8P56748 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN8P56748 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN8P56748 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN8P56748 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN8P56748 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN8P56748 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CLDN8P56748 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN8P56748 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN8P56748 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
CLDN8P56748 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.15■□□□□ 0.66
CLDN8P56748 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.15■□□□□ 0.66
CLDN8P56748 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN8P56748 AC007322.4-201ENST00000509611 723 ntBASIC19.15■□□□□ 0.66
CLDN8P56748 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLDN8P56748 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLDN8P56748 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN8P56748 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN8P56748 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN8P56748 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN8P56748 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN8P56748 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN8P56748 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.14■□□□□ 0.66
CLDN8P56748 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.14■□□□□ 0.66
CLDN8P56748 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN8P56748 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN8P56748 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN8P56748 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN8P56748 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CLDN8P56748 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN8P56748 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN8P56748 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN8P56748 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN8P56748 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CLDN8P56748 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN8P56748 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN8P56748 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN8P56748 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms