Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLDN6P56747 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 AC005521.1-201ENST00000393351 872 ntBASIC19.43■□□□□ 0.7
CLDN6P56747 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CLDN6P56747 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN6P56747 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN6P56747 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN6P56747 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CLDN6P56747 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN6P56747 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN6P56747 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.43■□□□□ 0.7
CLDN6P56747 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN6P56747 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 AC079598.2-202ENST00000546624 1451 ntBASIC19.42■□□□□ 0.7
CLDN6P56747 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 PGM5P4-201ENST00000421970 445 ntBASIC19.42■□□□□ 0.7
CLDN6P56747 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN6P56747 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN6P56747 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN6P56747 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN6P56747 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN6P56747 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN6P56747 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLDN6P56747 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 AP000525.1-201ENST00000608286 694 ntBASIC19.42■□□□□ 0.7
CLDN6P56747 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN6P56747 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLDN6P56747 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN6P56747 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN6P56747 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLDN6P56747 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN6P56747 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN6P56747 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN6P56747 PKD1P6-201ENST00000343738 4769 ntBASIC19.41■□□□□ 0.7
CLDN6P56747 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN6P56747 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN6P56747 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN6P56747 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN6P56747 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN6P56747 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN6P56747 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN6P56747 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN6P56747 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN6P56747 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN6P56747 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN6P56747 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN6P56747 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN6P56747 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN6P56747 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 AL390955.1-201ENST00000428694 934 ntBASIC19.4■□□□□ 0.7
CLDN6P56747 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 RBM17P1-201ENST00000453646 1190 ntBASIC19.4■□□□□ 0.7
CLDN6P56747 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.4■□□□□ 0.7
CLDN6P56747 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN6P56747 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN6P56747 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CLDN6P56747 NBPF21P-201ENST00000425093 1451 ntBASIC19.4■□□□□ 0.7
CLDN6P56747 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN6P56747 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN6P56747 ECEL1P1-201ENST00000373592 1742 ntBASIC19.39■□□□□ 0.7
CLDN6P56747 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.39■□□□□ 0.7
CLDN6P56747 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN6P56747 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN6P56747 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN6P56747 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.39■□□□□ 0.7
CLDN6P56747 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.39■□□□□ 0.7
CLDN6P56747 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.39■□□□□ 0.7
CLDN6P56747 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN6P56747 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN6P56747 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN6P56747 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms